EnhancerDB
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  3. rs60343977[chr17:853477]
Enhancers that have rs60343977[chr17:853477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs60343977[chr17:853477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 851863 853541 TCF7L2 GTRD no Colon (HCT116) 21739050
chr17 851863 853541 TCF7L2 GTRD no Colon (HCT116) 108227848
chr17 853472 853487 PRDM1 JASPAR yes 52644158
chr17 853473 853483 SP1 JASPAR yes 52644159
chr17 853476 853486 MZF1 JASPAR yes 52644160
Genes associated with rs60343977[chr17:853477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More