EnhancerDB
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  3. rs60398378[chr1:203249565]
Enhancers that have rs60398378[chr1:203249565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60398378[chr1:203249565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203249555 203249576 IRF1 JASPAR yes 34612907
chr1 203249557 203249572 PRDM1 JASPAR yes 34612908
chr1 203249558 203249568 TEAD1 JASPAR yes 34612909
chr1 203249558 203249568 TEAD4 JASPAR yes 34612910
chr1 203249559 203249580 IRF1 JASPAR yes 34612911
chr1 203249560 203249581 IRF1 JASPAR yes 34612912
chr1 203249561 203249582 IRF1 JASPAR yes 34612913
chr1 203249562 203249577 FOXP1 JASPAR yes 34612914
chr1 203249562 203249583 IRF1 JASPAR yes 34612915
chr1 203249563 203249584 IRF1 JASPAR yes 34612916
chr1 203249564 203249579 FOXP1 JASPAR yes 34612917
chr1 203249564 203249585 IRF1 JASPAR yes 34612918
chr1 203249565 203249580 FOXP1 JASPAR yes 34612919
chr1 203249565 203249586 IRF1 JASPAR yes 34612920
Genes associated with rs60398378[chr1:203249565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More