EnhancerDB
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  3. rs60538171[chr17:42172526]
Enhancers that have rs60538171[chr17:42172526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60538171[chr17:42172526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42172514 42172528 POU1F1 JASPAR yes 54386261
chr17 42172515 42172527 POU3F1 JASPAR yes 54386262
chr17 42172515 42172527 POU3F2 JASPAR yes 54386263
chr17 42172516 42172528 POU2F1 JASPAR yes 54386265
chr17 42172517 42172526 POU5F1B JASPAR yes 54386266
Genes associated with rs60538171[chr17:42172526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More