EnhancerDB
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  3. rs60546950[chr5:159597999]
Enhancers that have rs60546950[chr5:159597999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60546950[chr5:159597999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159597993 159598002 SNAI2 JASPAR yes 67346156
chr5 159597993 159598003 ID4 JASPAR yes 67346157
chr5 159597993 159598003 TCF3 JASPAR yes 67346158
chr5 159597993 159598003 TCF4 JASPAR yes 67346159
Genes associated with rs60546950[chr5:159597999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More