EnhancerDB
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  3. rs60560758[chr1:8476416]
Enhancers that have rs60560758[chr1:8476416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60560758[chr1:8476416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8476405 8476419 PLAG1 JASPAR yes 26551289
chr1 8476412 8476417 SP1 TRANSFAC yes 26551290
chr1 8476413 8476418 SP1 TRANSFAC yes 26551291
chr1 8476416 8476421 SP1 TRANSFAC yes 26551292
Genes associated with rs60560758[chr1:8476416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More