EnhancerDB
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  3. rs60588592[chr1:225794626]
Enhancers that have rs60588592[chr1:225794626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs60588592[chr1:225794626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225794618 225794629 PHOX2A JASPAR yes 35754668
chr1 225794620 225794631 CDX2 JASPAR yes 35754669
chr1 225794621 225794632 HOXA10 JASPAR yes 35754670
chr1 225794622 225794626 H1TF2 TRANSFAC yes 35754671
chr1 225794622 225794626 NFE TRANSFAC yes 35754672
chr1 225794622 225794626 SRF TRANSFAC yes 35754673
chr1 225794622 225794631 CDX1 JASPAR yes 35754674
chr1 225794622 225794632 HOXA13 JASPAR yes 35754675
chr1 225794622 225794632 HOXB13 JASPAR yes 35754676
chr1 225794622 225794632 HOXD13 JASPAR yes 35754677
Genes associated with rs60588592[chr1:225794626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More