EnhancerDB
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  3. rs60606600[chr5:172282885]
Enhancers that have rs60606600[chr5:172282885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60606600[chr5:172282885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172282879 172282892 TFAP2A JASPAR yes 67835265
chr5 172282879 172282892 TFAP2B JASPAR yes 67835266
chr5 172282879 172282892 TFAP2C JASPAR yes 67835267
chr5 172282880 172282895 ZIC4 JASPAR yes 67835268
chr5 172282884 172282889 SP1 TRANSFAC yes 67835269
chr5 172282884 172282890 SP1 TRANSFAC yes 67835270
Genes associated with rs60606600[chr5:172282885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More