EnhancerDB
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  3. rs60730056[chr19:2623860]
Enhancers that have rs60730056[chr19:2623860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs60730056[chr19:2623860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2620066 2624287 ZNF274 GTRD no Blood (GM12878) 21837675
chr19 2620066 2624287 ZNF274 GTRD no Blood (GM12878) 108363244
chr19 2620066 2624287 ZNF274 GTRD no Blood (GM12878) 108363245
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 21837677
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363248
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363249
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363250
chr19 2620106 2625995 ZNF274 GTRD no Blood (GM12878) 108363251
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 21837827
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 108363412
chr19 2622272 2625966 ZNF274 GTRD no Blood (GM12878) 108363413
chr19 2623851 2623870 PAX5 JASPAR yes 112084905
Genes associated with rs60730056[chr19:2623860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More