EnhancerDB
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  3. rs60742188[chr17:43249437]
Enhancers that have rs60742188[chr17:43249437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs60742188[chr17:43249437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43247783 43250788 POLR2A UCSC Txn Factor no Conserved 108263878
chr17 43248966 43249470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763199
chr17 43248970 43249620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763200
chr17 43249303 43249673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763201
chr17 43249334 43249710 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763202
chr17 43249370 43249716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763203
chr17 43249429 43249445 ZNF143 JASPAR yes 54432794
Genes associated with rs60742188[chr17:43249437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More