EnhancerDB
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  3. rs609292[chr17:42180436]
Enhancers that have rs609292[chr17:42180436]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs609292[chr17:42180436]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42180426 42180445 CTCF JASPAR yes 54387490
chr17 42180428 42180438 FIGLA JASPAR yes 54387491
chr17 42180428 42180438 TCF4 JASPAR yes 54387492
chr17 42180430 42180439 ZEB1 JASPAR yes 54387493
chr17 42180432 42180437 SP1 TRANSFAC yes 54387494
Genes associated with rs609292[chr17:42180436], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More