EnhancerDB
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  3. rs61329902[chr2:232528614]
Enhancers that have rs61329902[chr2:232528614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232527256 232532109 vista1014
VISTA
Transcript factors that have rs61329902[chr2:232528614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232528608 232528629 IRF1 JASPAR yes 68301112
chr2 232528608 232528629 IRF1 JASPAR yes 81733383
chr2 232528609 232528630 IRF1 JASPAR yes 68301113
chr2 232528609 232528630 IRF1 JASPAR yes 81733384
chr2 232528611 232528632 IRF1 JASPAR yes 68301114
chr2 232528611 232528632 IRF1 JASPAR yes 81733385
chr2 232528613 232528628 FOXP1 JASPAR yes 68301115
chr2 232528613 232528628 FOXP1 JASPAR yes 81733386
chr2 232528614 232528629 FOXP1 JASPAR yes 68301116
chr2 232528614 232528629 FOXP1 JASPAR yes 81733387
Genes associated with rs61329902[chr2:232528614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More