EnhancerDB
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  3. rs61524025[chr1:173378452]
Enhancers that have rs61524025[chr1:173378452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs61524025[chr1:173378452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173378444 173378455 PHOX2A JASPAR yes 33196509
chr1 173378444 173378455 PROP1 JASPAR yes 33196510
chr1 173378450 173378454 YY1 TRANSFAC yes 33196511
chr1 173378450 173378460 HOXB13 JASPAR yes 33196512
Genes associated with rs61524025[chr1:173378452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More