EnhancerDB
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  3. rs61568272[chr12:125218562]
Enhancers that have rs61568272[chr12:125218562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs61568272[chr12:125218562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125218503 125218863 SOX2 GTRD no Neural Stem Cells (H9) 21582433
chr12 125218551 125218569 RARA JASPAR yes 124415197
chr12 125218558 125218571 NR2F1 JASPAR yes 124415198
chr12 125218562 125218570 CREB1 JASPAR yes 124415199
Genes associated with rs61568272[chr12:125218562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More