EnhancerDB
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  3. rs616402[chr1:10566272]
Enhancers that have rs616402[chr1:10566272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs616402[chr1:10566272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10566268 10566283 JUND JASPAR yes 26718572
chr1 10566269 10566282 JUN JASPAR yes 26718573
chr1 10566270 10566284 BATF3 JASPAR yes 26718574
Genes associated with rs616402[chr1:10566272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More