EnhancerDB
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  3. rs61780496[chr1:23448519]
Enhancers that have rs61780496[chr1:23448519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs61780496[chr1:23448519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23448484 23448996 ZNF274 GTRD no Bone Marrow (K562) 107802411
chr1 23448504 23448519 FOXA1 JASPAR yes 27415140
chr1 23448508 23448522 POU4F1 JASPAR yes 27415145
chr1 23448509 23448520 PHOX2A JASPAR yes 27415146
chr1 23448509 23448520 PROP1 JASPAR yes 27415147
chr1 23448511 23448525 POU4F1 JASPAR yes 27415148
chr1 23448512 23448525 DUXA JASPAR yes 27415149
chr1 23448513 23448524 DUX4 JASPAR yes 27415150
chr1 23448513 23448524 PHOX2A JASPAR yes 27415151
chr1 23448513 23448524 PROP1 JASPAR yes 27415152
chr1 23448513 23448529 POU4F2 JASPAR yes 27415153
chr1 23448513 23448529 POU4F3 JASPAR yes 27415154
chr1 23448514 23448524 PAX3 JASPAR yes 27415155
chr1 23448514 23448524 PAX7 JASPAR yes 27415156
chr1 23448515 23448529 POU4F1 JASPAR yes 27415157
chr1 23448515 23448530 HNF1A JASPAR yes 27415158
chr1 23448516 23448526 GSX1 JASPAR yes 27415159
chr1 23448516 23448526 GSX2 JASPAR yes 27415160
chr1 23448516 23448526 LHX2 JASPAR yes 27415161
chr1 23448516 23448526 LHX6 JASPAR yes 27415162
chr1 23448516 23448526 MNX1 JASPAR yes 27415163
chr1 23448516 23448526 NOTO JASPAR yes 27415164
chr1 23448516 23448526 POU6F1 JASPAR yes 27415165
chr1 23448516 23448526 RAX JASPAR yes 27415166
chr1 23448516 23448531 HNF1A JASPAR yes 27415167
chr1 23448517 23448525 ISX JASPAR yes 27415168
chr1 23448517 23448525 LMX1A JASPAR yes 27415169
chr1 23448517 23448525 LMX1B JASPAR yes 27415170
chr1 23448517 23448525 NKX6-1 JASPAR yes 27415171
chr1 23448517 23448525 NKX6-2 JASPAR yes 27415172
chr1 23448517 23448525 PRRX1 JASPAR yes 27415173
chr1 23448517 23448525 RAX2 JASPAR yes 27415174
chr1 23448517 23448525 SHOX JASPAR yes 27415175
chr1 23448517 23448525 UNCX JASPAR yes 27415176
chr1 23448517 23448525 VAX1 JASPAR yes 27415177
chr1 23448517 23448528 PHOX2A JASPAR yes 27415178
chr1 23448517 23448528 PROP1 JASPAR yes 27415179
chr1 23448517 23448531 POU4F1 JASPAR yes 27415180
chr1 23448517 23448533 POU4F2 JASPAR yes 27415181
chr1 23448517 23448533 POU4F3 JASPAR yes 27415182
chr1 23448518 23448528 PAX3 JASPAR yes 27415183
chr1 23448518 23448528 PAX7 JASPAR yes 27415184
chr1 23448518 23448529 PHOX2A JASPAR yes 27415185
chr1 23448518 23448529 PROP1 JASPAR yes 27415186
chr1 23448519 23448533 POU4F1 JASPAR yes 27415187
chr1 23448519 23448534 HNF1A JASPAR yes 27415188
Genes associated with rs61780496[chr1:23448519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More