EnhancerDB
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  3. rs61828010[chr1:203519603]
Enhancers that have rs61828010[chr1:203519603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs61828010[chr1:203519603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203518614 203520743 ZBTB33 GTRD no Brain (SK-N-SH) 21369441
chr1 203518802 203522161 ZNF274 GTRD no Cervix (HeLa-S3) 21369442
chr1 203518877 203522236 ZBTB33 GTRD no Brain (SK-N-SH) 21369443
chr1 203518928 203520793 ZBTB33 GTRD no Brain (SK-N-SH) 21369444
chr1 203519008 203519897 SOX2 GTRD no Neural Stem Cells (H9) 21369445
chr1 203519056 203519804 SOX2 GTRD no Neural Stem Cells (H9) 21369447
chr1 203519065 203520332 SOX2 GTRD no Neural Stem Cells (H9) 21369448
chr1 203519083 203519885 SOX2 GTRD no Neural Stem Cells (H9) 21369449
chr1 203519143 203519860 SOX2 GTRD no Neural Stem Cells (H9) 21369450
chr1 203519171 203519955 SOX2 GTRD no Neural Stem Cells (H9) 21369451
chr1 203519180 203520061 ZBTB33 GTRD no Brain (SK-N-SH) 21369452
chr1 203519181 203519971 ZBTB33 GTRD no Brain (SK-N-SH) 21369453
chr1 203519196 203519904 ZBTB33 GTRD no Brain (SK-N-SH) 21369454
chr1 203519209 203519933 ZBTB33 GTRD no Brain (SK-N-SH) 21369455
chr1 203519224 203520033 ZBTB33 GTRD no Brain (SK-N-SH) 21369456
chr1 203519232 203521926 ZBTB33 GTRD no Brain (SK-N-SH) 21369457
chr1 203519241 203519934 ZBTB33 GTRD no Brain (SK-N-SH) 21369458
chr1 203519258 203519931 SOX2 GTRD no Neural Stem Cells (H9) 21369459
chr1 203519275 203521022 ZNF274 GTRD no Cervix (HeLa-S3) 21369460
chr1 203519284 203519988 ZNF274 GTRD no Cervix (HeLa-S3) 21369461
chr1 203519297 203521969 ZNF274 GTRD no Cervix (HeLa-S3) 21369462
chr1 203519301 203519795 SOX2 GTRD no Neural Stem Cells (H9) 21369463
chr1 203519332 203519914 ZNF274 GTRD no Cervix (HeLa-S3) 21369464
chr1 203519382 203519869 ZBTB33 GTRD no Brain (SK-N-SH) 21369465
chr1 203519386 203520086 ZNF274 GTRD no Cervix (HeLa-S3) 21369466
chr1 203519412 203519830 SOX2 GTRD no Neural Stem Cells (H9) 21369467
chr1 203519594 203519610 SOX8 JASPAR yes 34638833
chr1 203519598 203519612 POU4F1 JASPAR yes 34638834
Genes associated with rs61828010[chr1:203519603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More