EnhancerDB
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  3. rs61835604[chr1:226891714]
Enhancers that have rs61835604[chr1:226891714]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs61835604[chr1:226891714]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226890795 226891803 POLR2A UCSC Txn Factor no Conserved 107876276
chr1 226891045 226891751 E2F1 UCSC Txn Factor no Conserved 107876291
chr1 226891069 226892789 TCF7L2 GTRD no Colon (HCT116) 21387253
chr1 226891069 226892789 TCF7L2 GTRD no Colon (HCT116) 107876298
chr1 226891095 226891751 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21387257
chr1 226891095 226891751 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107876303
chr1 226891698 226891717 REST JASPAR yes 35835614
Genes associated with rs61835604[chr1:226891714], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More