EnhancerDB
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  3. rs61932570[chr12:125255404]
Enhancers that have rs61932570[chr12:125255404]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs61932570[chr12:125255404]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125255124 125255674 TCF7L2 GTRD no Colon (HCT116) 21582993
chr12 125255400 125255412 PKNOX1 JASPAR yes 124420281
chr12 125255400 125255412 PKNOX2 JASPAR yes 124420282
chr12 125255400 125255412 TGIF1 JASPAR yes 124420283
chr12 125255400 125255412 TGIF2 JASPAR yes 124420284
chr12 125255402 125255419 RARA JASPAR yes 124420285
chr12 125255402 125255419 RXRA JASPAR yes 124420286
chr12 125255402 125255423 REST JASPAR yes 124420287
Genes associated with rs61932570[chr12:125255404], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More