EnhancerDB
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  3. rs620055[chr6:112314402]
Enhancers that have rs620055[chr6:112314402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs620055[chr6:112314402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112314168 112314433 RUNX3 UCSC Txn Factor no Conserved 108541349
chr6 112314397 112314402 GATA2 JASPAR yes 104395403
chr6 112314402 112314408 ZNF354C JASPAR yes 104395404
Genes associated with rs620055[chr6:112314402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More