EnhancerDB
  1. Home
  2. SNP
  3. rs62006053[chr15:67427590]
Enhancers that have rs62006053[chr15:67427590]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67361222 67430135 enh3672
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62006053[chr15:67427590]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67426655 67427712 ZNF143 GTRD no Epithelial (MCF-7) 21662785
chr15 67426655 67427712 ZNF143 GTRD no Epithelial (MCF-7) 108149719
chr15 67426712 67427590 ZNF143 GTRD no Epithelial (MCF-7) 21662789
chr15 67426712 67427590 ZNF143 GTRD no Epithelial (MCF-7) 108149725
chr15 67427585 67427599 GATA2 JASPAR yes 24211682
chr15 67427587 67427595 GATA3 JASPAR yes 24211683
Genes associated with rs62006053[chr15:67427590], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More