EnhancerDB
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  3. rs62048221[chr16:88846552]
Enhancers that have rs62048221[chr16:88846552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs62048221[chr16:88846552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88846536 88846553 RARA JASPAR yes 12303647
chr16 88846536 88846553 RXRA JASPAR yes 12303648
chr16 88846543 88846556 NR2F1 JASPAR yes 12303649
chr16 88846545 88846556 ESRRA JASPAR yes 12303650
chr16 88846547 88846561 RXRB JASPAR yes 12303651
Genes associated with rs62048221[chr16:88846552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More