EnhancerDB
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  3. rs62048641[chr16:85229315]
Enhancers that have rs62048641[chr16:85229315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62048641[chr16:85229315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85222935 85229799 ZNF274 GTRD no Blood (GM12878) 21720680
chr16 85224838 85231028 ZNF274 GTRD no Blood (GM12878) 21720704
chr16 85226426 85229718 ZNF274 GTRD no Blood (GM12878) 21720736
chr16 85226537 85229455 ZNF274 GTRD no Blood (GM12878) 21720743
chr16 85227294 85229716 TCF7L2 GTRD no Colon (HCT116) 21720796
chr16 85227498 85229738 TCF7L2 GTRD no Colon (HCT116) 21720807
chr16 85228668 85229493 TCF7L2 GTRD no Colon (HCT116) 21720835
chr16 85228813 85229606 TCF7L2 GTRD no Colon (HCT116) 21720836
chr16 85228844 85229677 ZNF143 GTRD no Epithelial (MCF-7) 21720837
chr16 85228879 85229437 ZNF274 GTRD no Bone Marrow (K562) 21720838
chr16 85228891 85229669 ZNF143 GTRD no Epithelial (MCF-7) 21720840
chr16 85228961 85229426 TCF7L2 GTRD no Colon (HCT116) 21720841
chr16 85228962 85229524 TCF7L2 GTRD no Colon (HCT116) 21720842
chr16 85228976 85229492 TCF7L2 GTRD no Colon (HCT116) 21720843
chr16 85229175 85230000 ZNF274 GTRD no Blood (GM12878) 21720844
chr16 85229298 85229316 RARA JASPAR yes 12031006
chr16 85229305 85230901 ZNF274 GTRD no Blood (GM12878) 21720845
chr16 85229309 85229323 NR2F1 JASPAR yes 12031009
chr16 85229315 85229318 MYB TRANSFAC yes 12031010
Genes associated with rs62048641[chr16:85229315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More