EnhancerDB
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  3. rs62048642[chr16:85229629]
Enhancers that have rs62048642[chr16:85229629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62048642[chr16:85229629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85222935 85229799 ZNF274 GTRD no Blood (GM12878) 21720680
chr16 85224838 85231028 ZNF274 GTRD no Blood (GM12878) 21720704
chr16 85226426 85229718 ZNF274 GTRD no Blood (GM12878) 21720736
chr16 85227294 85229716 TCF7L2 GTRD no Colon (HCT116) 21720796
chr16 85227498 85229738 TCF7L2 GTRD no Colon (HCT116) 21720807
chr16 85228844 85229677 ZNF143 GTRD no Epithelial (MCF-7) 21720837
chr16 85228891 85229669 ZNF143 GTRD no Epithelial (MCF-7) 21720840
chr16 85229175 85230000 ZNF274 GTRD no Blood (GM12878) 21720844
chr16 85229305 85230901 ZNF274 GTRD no Blood (GM12878) 21720845
chr16 85229552 85230438 ZNF274 GTRD no Blood (GM12878) 21720846
chr16 85229629 85229632 MYB TRANSFAC yes 12031037
Genes associated with rs62048642[chr16:85229629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More