EnhancerDB
  1. Home
  2. SNP
  3. rs62059998[chr17:48968055]
Enhancers that have rs62059998[chr17:48968055]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs62059998[chr17:48968055]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48967328 48968125 TCF7L2 GTRD no Colon (HCT116) 21770279
chr17 48967954 48968518 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770280
chr17 48967992 48968392 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770281
chr17 48968002 48968506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770282
chr17 48968037 48968413 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770283
chr17 48968049 48968068 PAX5 JASPAR yes 54729729
chr17 48968049 48968439 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770284
Genes associated with rs62059998[chr17:48968055], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More