EnhancerDB
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  3. rs62266862[chr3:128954359]
Enhancers that have rs62266862[chr3:128954359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 128941525 128955643 enh7525
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr3 128954316 128954512 vista42400
VISTA
Transcript factors that have rs62266862[chr3:128954359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 128954356 128954367 HOXA10 JASPAR yes 5648101
chr3 128954356 128954367 HOXA10 JASPAR yes 71050820
chr3 128954357 128954366 CDX1 JASPAR yes 5648102
chr3 128954357 128954366 CDX1 JASPAR yes 71050821
chr3 128954357 128954368 CDX2 JASPAR yes 5648103
chr3 128954357 128954368 CDX2 JASPAR yes 71050822
Genes associated with rs62266862[chr3:128954359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More