EnhancerDB
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  3. rs62400964[chr6:30791533]
Enhancers that have rs62400964[chr6:30791533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62400964[chr6:30791533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30791522 30791541 CTCF JASPAR yes 101055363
chr6 30791530 30791535 SP1 TRANSFAC yes 101055364
chr6 30791533 30791547 PLAG1 JASPAR yes 101055365
Genes associated with rs62400964[chr6:30791533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More