EnhancerDB
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  3. rs62400979[chr6:30795600]
Enhancers that have rs62400979[chr6:30795600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62400979[chr6:30795600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30795591 30795611 RREB1 JASPAR yes 101056040
chr6 30795594 30795614 RREB1 JASPAR yes 101056041
chr6 30795597 30795617 RREB1 JASPAR yes 101056042
chr6 30795598 30795618 RREB1 JASPAR yes 101056043
chr6 30795599 30795613 GLIS2 JASPAR yes 101056044
chr6 30795599 30795613 GLIS3 JASPAR yes 101056045
Genes associated with rs62400979[chr6:30795600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 30687978 30693203 + TUBB ENSG00000196230.8 30687978 102397 Pancreas 0.199581 6350