EnhancerDB
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  3. rs62408723[chr6:30784999]
Enhancers that have rs62408723[chr6:30784999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62408723[chr6:30784999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30784958 30785395 RELA UCSC Txn Factor no Conserved 108539549
chr6 30784994 30785009 TFAP2A JASPAR yes 101054291
chr6 30784994 30785009 TFAP2C JASPAR yes 101054292
chr6 30784996 30785011 TFAP2C JASPAR yes 101054293
chr6 30784997 30785008 TFAP2A JASPAR yes 101054294
chr6 30784997 30785008 TFAP2B JASPAR yes 101054295
Genes associated with rs62408723[chr6:30784999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More