EnhancerDB
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  3. rs62408724[chr6:30785176]
Enhancers that have rs62408724[chr6:30785176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30785034 30785335 vista51548
VISTA
Transcript factors that have rs62408724[chr6:30785176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30784958 30785395 RELA UCSC Txn Factor no Conserved 108539549
chr6 30785051 30785316 RUNX3 UCSC Txn Factor no Conserved 108539550
chr6 30785168 30785182 IRF8 JASPAR yes 70344840
chr6 30785168 30785182 IRF8 JASPAR yes 101054326
chr6 30785174 30785191 ZNF410 JASPAR yes 70344842
chr6 30785174 30785191 ZNF410 JASPAR yes 101054328
chr6 30785176 30785181 GATA2 JASPAR yes 70344843
chr6 30785176 30785181 GATA2 JASPAR yes 101054329
Genes associated with rs62408724[chr6:30785176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More