EnhancerDB
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  3. rs62408727[chr6:30786517]
Enhancers that have rs62408727[chr6:30786517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62408727[chr6:30786517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30786191 30786731 POLR2A UCSC Txn Factor no Conserved 108539552
chr6 30786245 30786561 EP300 UCSC Txn Factor no Conserved 108539553
chr6 30786502 30786522 TBX19 JASPAR yes 101054539
chr6 30786504 30786520 T JASPAR yes 101054540
Genes associated with rs62408727[chr6:30786517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More