EnhancerDB
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  3. rs626000[chr19:5961848]
Enhancers that have rs626000[chr19:5961848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs626000[chr19:5961848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5961831 5961852 ZNF263 JASPAR yes 112248779
chr19 5961837 5961851 RXRB JASPAR yes 112248780
chr19 5961837 5961852 NR2C2 JASPAR yes 112248781
chr19 5961845 5961859 GLIS3 JASPAR yes 112248782
chr19 5961845 5961859 ZIC1 JASPAR yes 112248783
chr19 5961845 5961860 ZIC3 JASPAR yes 112248784
chr19 5961845 5961860 ZIC4 JASPAR yes 112248785
Genes associated with rs626000[chr19:5961848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More