EnhancerDB
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  3. rs63615960[chr18:55881401]
Enhancers that have rs63615960[chr18:55881401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr18 55881305 55881780 vista27582
VISTA
Transcript factors that have rs63615960[chr18:55881401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55881182 55881432 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338146
chr18 55881398 55881413 TFAP2A JASPAR yes 42714184
chr18 55881398 55881413 TFAP2C JASPAR yes 42714185
chr18 55881398 55881413 TFAP2A JASPAR yes 110927641
chr18 55881398 55881413 TFAP2C JASPAR yes 110927642
chr18 55881400 55881406 NFE2 TRANSFAC yes 42714186
chr18 55881400 55881406 NFE2 TRANSFAC yes 110927643
chr18 55881401 55881412 TFAP2A JASPAR yes 42714187
chr18 55881401 55881412 TFAP2A JASPAR yes 110927644
chr18 55881401 55881413 TFAP2A JASPAR yes 42714188
chr18 55881401 55881413 TFAP2B JASPAR yes 42714189
chr18 55881401 55881413 TFAP2C JASPAR yes 42714190
chr18 55881401 55881413 TFAP2A JASPAR yes 110927645
chr18 55881401 55881413 TFAP2B JASPAR yes 110927646
chr18 55881401 55881413 TFAP2C JASPAR yes 110927647
Genes associated with rs63615960[chr18:55881401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More