EnhancerDB
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  3. rs6424172[chr1:24615484]
Enhancers that have rs6424172[chr1:24615484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6424172[chr1:24615484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24615474 24615487 TFAP2A JASPAR yes 27496419
chr1 24615474 24615487 TFAP2B JASPAR yes 27496420
chr1 24615474 24615487 TFAP2C JASPAR yes 27496421
chr1 24615481 24615486 SP1 TRANSFAC yes 27496422
chr1 24615481 24615493 YY1 JASPAR yes 27496423
Genes associated with rs6424172[chr1:24615484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More