EnhancerDB
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  3. rs6425229[chr1:173377632]
Enhancers that have rs6425229[chr1:173377632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs6425229[chr1:173377632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173377620 173377633 DUXA JASPAR yes 33196388
chr1 173377621 173377632 DUX4 JASPAR yes 33196389
chr1 173377621 173377632 PHOX2A JASPAR yes 33196390
chr1 173377621 173377632 PROP1 JASPAR yes 33196391
chr1 173377631 173377637 TBP TRANSFAC yes 33196392
Genes associated with rs6425229[chr1:173377632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More