EnhancerDB
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  3. rs6425233[chr1:173394054]
Enhancers that have rs6425233[chr1:173394054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs6425233[chr1:173394054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173392660 173394101 ZNF274 GTRD no Bone Marrow (K562) 21351343
chr1 173392826 173394129 ZBTB33 GTRD no Brain (SK-N-SH) 21351346
chr1 173392831 173394113 ZBTB33 GTRD no Brain (SK-N-SH) 21351347
chr1 173392842 173394093 TCF7L2 GTRD no Colon (HCT116) 21351349
chr1 173392850 173394121 ZBTB33 GTRD no Brain (SK-N-SH) 21351351
chr1 173392875 173394192 ZBTB33 GTRD no Brain (SK-N-SH) 21351354
chr1 173392980 173394101 ZBTB33 GTRD no Brain (SK-N-SH) 21351371
chr1 173393007 173394074 ZNF274 GTRD no Cervix (HeLa-S3) 21351377
chr1 173393007 173394154 ZNF274 GTRD no Cervix (HeLa-S3) 21351378
chr1 173393065 173394359 TEF1 GTRD no Bone (Osteoblast) 21351389
chr1 173393823 173394153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351408
chr1 173393891 173394155 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351409
chr1 173393950 173394290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351410
Genes associated with rs6425233[chr1:173394054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More