EnhancerDB
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  3. rs6426798[chr1:19719728]
Enhancers that have rs6426798[chr1:19719728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6426798[chr1:19719728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19719719 19719730 NRF1 JASPAR yes 27184639
chr1 19719723 19719734 E2F1 JASPAR yes 27184640
chr1 19719724 19719729 SP1 TRANSFAC yes 27184641
Genes associated with rs6426798[chr1:19719728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 19967048 19984945 + NBL1 ENSG00000158747.9 19967048 247320 Thyroid 0.00456567 265