EnhancerDB
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  3. rs6438857[chr3:124557643]
Enhancers that have rs6438857[chr3:124557643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6438857[chr3:124557643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124557637 124557650 NFKB1 JASPAR yes 5406233
chr3 124557637 124557650 NFKB2 JASPAR yes 5406234
Genes associated with rs6438857[chr3:124557643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 124480795 124620265 - ITGB5 ENSG00000082781.7 124620265 0 Lung 0.00630765 4021