EnhancerDB
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  3. rs6445842[chr3:57028359]
Enhancers that have rs6445842[chr3:57028359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57012585 57055453 enh7240
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs6445842[chr3:57028359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57028347 57028359 PKNOX1 JASPAR yes 2619909
chr3 57028347 57028359 PKNOX2 JASPAR yes 2619910
chr3 57028347 57028359 TGIF1 JASPAR yes 2619911
chr3 57028347 57028359 TGIF2 JASPAR yes 2619912
chr3 57028357 57028361 YY1 TRANSFAC yes 2619915
Genes associated with rs6445842[chr3:57028359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More