EnhancerDB
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  3. rs6453396[chr5:77785387]
Enhancers that have rs6453396[chr5:77785387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs6453396[chr5:77785387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77785369 77785389 RREB1 JASPAR yes 63591674
chr5 77785379 77785387 TBX5 JASPAR yes 63591675
chr5 77785379 77785388 ZEB1 JASPAR yes 63591676
chr5 77785379 77785392 ZBTB18 JASPAR yes 63591677
chr5 77785380 77785390 ID4 JASPAR yes 63591678
chr5 77785380 77785390 TCF3 JASPAR yes 63591679
chr5 77785380 77785390 TCF4 JASPAR yes 63591680
chr5 77785382 77785387 USF2 TRANSFAC yes 63591681
Genes associated with rs6453396[chr5:77785387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More