EnhancerDB
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  3. rs6457116[chr6:29938025]
Enhancers that have rs6457116[chr6:29938025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6457116[chr6:29938025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29938017 29938037 ESR1 JASPAR yes 101019519
chr6 29938019 29938029 FIGLA JASPAR yes 101019520
chr6 29938019 29938029 ID4 JASPAR yes 101019521
chr6 29938019 29938029 TCF3 JASPAR yes 101019522
chr6 29938019 29938029 TCF4 JASPAR yes 101019523
chr6 29938021 29938030 ZEB1 JASPAR yes 101019524
Genes associated with rs6457116[chr6:29938025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More