EnhancerDB
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  3. rs646535[chr1:229352355]
Enhancers that have rs646535[chr1:229352355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs646535[chr1:229352355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229352308 229352752 ZNF143 GTRD no Epithelial (MCF-7) 21390740
chr1 229352350 229352355 SP1 TRANSFAC yes 35975401
chr1 229352350 229352361 E2F4 JASPAR yes 35975402
chr1 229352350 229352361 E2F6 JASPAR yes 35975403
chr1 229352351 229352356 SP1 TRANSFAC yes 35975404
Genes associated with rs646535[chr1:229352355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More