EnhancerDB
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  3. rs647393[chr1:229352538]
Enhancers that have rs647393[chr1:229352538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs647393[chr1:229352538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229352308 229352752 ZNF143 GTRD no Epithelial (MCF-7) 21390740
chr1 229352523 229352541 RARA JASPAR yes 35975421
chr1 229352530 229352543 NR2F1 JASPAR yes 35975422
chr1 229352534 229352542 CREB1 JASPAR yes 35975423
Genes associated with rs647393[chr1:229352538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More