EnhancerDB
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  3. rs6488939[chr12:122858250]
Enhancers that have rs6488939[chr12:122858250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122849366 122861555 enh15067
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6488939[chr12:122858250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122858239 122858252 DUXA JASPAR yes 124272612
chr12 122858240 122858251 DUX4 JASPAR yes 124272613
chr12 122858240 122858251 PHOX2A JASPAR yes 124272614
chr12 122858240 122858251 PROP1 JASPAR yes 124272615
Genes associated with rs6488939[chr12:122858250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More