EnhancerDB
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  3. rs6493013[chr15:42224824]
Enhancers that have rs6493013[chr15:42224824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6493013[chr15:42224824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42224813 42224829 ZNF143 JASPAR yes 23006927
chr15 42224815 42224825 GSC2 JASPAR yes 23006928
chr15 42224816 42224824 OTX2 JASPAR yes 23006929
Genes associated with rs6493013[chr15:42224824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More