EnhancerDB
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Enhancers that have rs6500502[chr16:88830604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6500502[chr16:88830604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88830088 88830638 TCF7L2 GTRD no Colon (HCT116) 21736925
chr16 88830088 88830638 TCF7L2 GTRD no Colon (HCT116) 108223373
chr16 88830206 88831226 ZBTB33 GTRD no Lung (A549) 108223380
chr16 88830230 88830889 ZNF143 GTRD no Epithelial (MCF-7) 21736929
chr16 88830230 88830889 ZNF143 GTRD no Epithelial (MCF-7) 108223381
chr16 88830246 88831280 ZNF143 GTRD no Epithelial (MCF-7) 21736930
chr16 88830246 88831280 ZNF143 GTRD no Epithelial (MCF-7) 108223382
chr16 88830599 88830613 SPI1 JASPAR yes 12301469
Genes associated with rs6500502[chr16:88830604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More