EnhancerDB
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  3. rs6502008[chr17:80830265]
Enhancers that have rs6502008[chr17:80830265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs6502008[chr17:80830265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 21800950
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 108313075
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 21800951
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 108313076
chr17 80830257 80830276 REST JASPAR yes 56390228
chr17 80830261 80830272 NRF1 JASPAR yes 56390229
chr17 80830262 80830266 LFA1 TRANSFAC yes 56390230
Genes associated with rs6502008[chr17:80830265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More