EnhancerDB
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  3. rs6502009[chr17:80830375]
Enhancers that have rs6502009[chr17:80830375]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs6502009[chr17:80830375]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 21800950
chr17 80830109 80830868 TCF7L2 GTRD no Colon (HCT116) 108313075
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 21800951
chr17 80830129 80830943 TCF7L2 GTRD no Colon (HCT116) 108313076
chr17 80830367 80830378 E2F1 JASPAR yes 21323369
chr17 80830367 80830378 E2F1 JASPAR yes 56390234
chr17 80830369 80830381 HES5 JASPAR yes 21323370
chr17 80830369 80830381 HES7 JASPAR yes 21323371
chr17 80830369 80830381 HES5 JASPAR yes 56390235
chr17 80830369 80830381 HES7 JASPAR yes 56390236
chr17 80830370 80830380 HEY2 JASPAR yes 21323372
chr17 80830370 80830380 HEY2 JASPAR yes 56390237
chr17 80830374 80830389 TP53 JASPAR yes 21323373
chr17 80830374 80830389 TP53 JASPAR yes 56390238
chr17 80830375 80830395 TP63 JASPAR yes 21323374
chr17 80830375 80830395 TP63 JASPAR yes 56390239
Genes associated with rs6502009[chr17:80830375], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More