EnhancerDB
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  3. rs6502604[chr17:2785411]
Enhancers that have rs6502604[chr17:2785411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs6502604[chr17:2785411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2785407 2785428 IRF1 JASPAR yes 52781726
chr17 2785409 2785430 IRF1 JASPAR yes 52781727
chr17 2785410 2785431 IRF1 JASPAR yes 52781728
chr17 2785411 2785426 FOXP1 JASPAR yes 52781729
chr17 2785411 2785432 IRF1 JASPAR yes 52781730
Genes associated with rs6502604[chr17:2785411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More