EnhancerDB
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  3. rs6535559[chr4:148691422]
Enhancers that have rs6535559[chr4:148691422]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 148667325 148718095 enh37177
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs6535559[chr4:148691422]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 148691416 148691426 TBR1 JASPAR yes 93520108
chr4 148691416 148691436 TBX19 JASPAR yes 93520109
chr4 148691417 148691431 PAX6 JASPAR yes 93520110
chr4 148691418 148691430 PKNOX2 JASPAR yes 93520111
chr4 148691418 148691434 T JASPAR yes 93520112
Genes associated with rs6535559[chr4:148691422], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More