EnhancerDB
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  3. rs653660[chr1:8279617]
Enhancers that have rs653660[chr1:8279617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs653660[chr1:8279617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8279605 8279620 MEF2C JASPAR yes 26529308
chr1 8279605 8279626 IRF1 JASPAR yes 26529309
chr1 8279606 8279617 PHOX2A JASPAR yes 26529310
chr1 8279606 8279617 PROP1 JASPAR yes 26529311
chr1 8279607 8279619 MEF2A JASPAR yes 26529312
chr1 8279611 8279632 IRF1 JASPAR yes 26529313
chr1 8279615 8279621 TBP TRANSFAC yes 26529314
Genes associated with rs653660[chr1:8279617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More